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When we're running on the autoscaling runners "directly," we can use git diff because the repo is cloned into the autoscaling environment. However, when we're using the docker plugin, it doesn't re-clone the repo... it just moves the files over.
The files it moves over include .git, but I guess there's more to a git repo being initialized than having the .git? I can research further and give more precise reasoning if necessary, but this works for now.